PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g11010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 118aa    MW: 13425.5 Da    PI: 10.642
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g11010genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.57.4e-064981440
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STC CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsK 40
                +h+ +Er RR++i +++  L++l+P +    +k   K
  CA01g11010 49 SHSLAERVRREKICKRMGFLKDLVPGC----NKITGK 81
                8************************98....333433 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.27E-1143107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.2274595IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-1145106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    Send to blast
MQCFSKQLPN NSNNSKKNSD TTKEKSKITE DKKPNYIHVK ARRGQATDSH SLAERVRREK  60
ICKRMGFLKD LVPGCNKITG KVGMPDEIIN YVQSFQRQIE VKKNKKQLSG LAFAHFD*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004230908.12e-46PREDICTED: transcription factor bHLH63-like isoform X2
SwissprotQ9ZPW32e-38HBI1_ARATH; Transcription factor HBI1
TrEMBLK4B3I32e-46K4B3I3_SOLLC; Uncharacterized protein
STRINGSolyc01g109700.2.15e-46(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40002142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.12e-36cryptochrome-interacting basic-helix-loop-helix 1